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    Vps24 Vacuolar protein sorting 24 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40542, updated on 4-Apr-2024

    Summary

    Official Symbol
    Vps24provided by FlyBase
    Official Full Name
    Vacuolar protein sorting 24provided by FlyBase
    Primary source
    FLYBASE:FBgn0037231
    Locus tag
    Dmel_CG9779
    See related
    AllianceGenome:FB:FBgn0037231
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9779; Dmel\CG9779; DmVPS24; dvps24; ESCRT; vps24
    Summary
    Predicted to be involved in several processes, including endosome transport via multivesicular body sorting pathway; intralumenal vesicle formation; and late endosome to vacuole transport. Predicted to be part of ESCRT III complex. Predicted to be active in multivesicular body. Is expressed in several structures, including embryonic brain; embryonic epidermis; embryonic/larval nervous system; embryonic/larval somatic muscle cell; and trunk mesoderm. Orthologous to several human genes including RNF103-CHMP3 (RNF103-CHMP3 readthrough). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    82A3-82A3; 3-47.1 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4307435..4310947, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (135369..136669, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene complexin Neighboring gene Neprilysin-like 11 Neighboring gene mir-929 stem loop Neighboring gene antisense RNA:CR46140 Neighboring gene Melanization Protease 1 Neighboring gene Suv3 helicase Neighboring gene Synaptotagmin 14 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in endosome transport via multivesicular body sorting pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intralumenal vesicle formation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in late endosome to vacuole transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vacuolar transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of ESCRT III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of ESCRT III complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in multivesicular body IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    vacuolar protein sorting 24
    Names
    CG9779-PA
    CG9779-PB
    Vps24-PA
    Vps24-PB
    charged multivesicular body protein 3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4307435..4310947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316528.1NP_001303457.1  vacuolar protein sorting 24, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VN02
      Conserved Domains (1) summary
      pfam03357
      Location:18187
      Snf7; Snf7
    2. NM_141194.3NP_649451.1  vacuolar protein sorting 24, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649451.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VN02
      Related
      FBpp0078598
      Conserved Domains (1) summary
      pfam03357
      Location:18187
      Snf7; Snf7