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    PTGFRN prostaglandin F2 receptor inhibitor [ Sus scrofa (pig) ]

    Gene ID: 397023, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PTGFRNprovided by VGNC
    Official Full Name
    prostaglandin F2 receptor inhibitorprovided by VGNC
    Primary source
    VGNC:VGNC:91955
    See related
    Ensembl:ENSSSCG00000006735
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 24.3), subcutaneous adipose (RPKM 16.7) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (103747007..103835192, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (113711852..113799380, complement)

    Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene transcription termination factor 2 Neighboring gene uncharacterized LOC110260337 Neighboring gene CD101 molecule Neighboring gene uncharacterized LOC110260470 Neighboring gene CD2 molecule

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    prostaglandin F2 receptor negative regulator
    Names
    adipocyte membrane protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

      Range
      103747007..103835192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013997237.2 → XP_013852691.2  prostaglandin F2 receptor negative regulator

      UniProtKB/TrEMBL
      A0A480TIQ5, A0A8D1LGT8
      Related
      ENSSSCP00000007183.5, ENSSSCT00000007378.5
      Conserved Domains (2) summary
      smart00406
      Location:39 → 121
      IGv; Immunoglobulin V-Type
      cl28434
      Location:281 → 373
      I-set; Immunoglobulin I-set domain
    Nucleotide Protein
    Heading Accession and Version

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