U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    EMB embigin [ Gallus gallus (chicken) ]

    Gene ID: 395242, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Symbol
    EMBprovided by CGNC
    Full Name
    embiginprovided by CGNC
    Primary source
    CGNC:11042
    See related
    Ensembl:ENSGALG00010013898
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZOV3
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: Z
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (15273927..15298545, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (15273927..15298545, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase Topors-like Neighboring gene E3 ubiquitin-protein ligase Topors-like Neighboring gene uncharacterized LOC121108358 Neighboring gene poly(ADP-ribose) polymerase family member 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The location of Z- and W-linked marker genes and sequence on the homomorphic sex chromosomes of the ostrich and the emu. Ogawa A, et al. Proc Natl Acad Sci U S A, 1998 Apr 14. PMID 9539751, Free PMC Article
    2. Predominant expression of a Z-chromosome-linked immunoglobulin superfamily gene, ZOV3, in steroidogenic cells of ovarian follicles and in embryonic gonads of chickens. Kunita R, et al. Differentiation, 1997 Nov. PMID 9404001
    3. Identification and localization of two genes on the chicken Z chromosome: implication of evolutionary conservation of the Z chromosome among avian species. Saitoh Y, et al. Chromosome Res, 1993 Nov. PMID 8156162
    4. Genetic variation among chicken lines and mammalian species in specific genes. Zhou H, et al. Poult Sci, 2001 Mar. PMID 11261557

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dendrite self-avoidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    embigin
    Names
    Ig superfamily protein ZOV3
    ZOV3 gene product
    embigin homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204557.2 → NP_989888.1  embigin

      See identical proteins and their annotated locations for NP_989888.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000089
      UniProtKB/TrEMBL
      A0A8V0YNW1, A2MXY3
      Related
      ENSGALP00010019675.1, ENSGALT00010033338.1
      Conserved Domains (2) summary
      cd00096
      Location:179 → 250
      Ig; Immunoglobulin domain
      smart00410
      Location:175 → 259
      IG_like; Immunoglobulin like

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15273927..15298545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046905189.1 → XP_046761145.1  embigin isoform X1

      UniProtKB/TrEMBL
      A2MXY3
      Related
      ENSGALP00010019671.1, ENSGALT00010033328.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15273927..15298545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934679.1 → XP_046790635.1  embigin isoform X1

      UniProtKB/TrEMBL
      A2MXY3
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous