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    cpa6.L carboxypeptidase A6 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379903, updated on 11-Apr-2024

    Summary

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    Official Symbol
    cpa6.L
    Official Full Name
    carboxypeptidase A6 L homeolog
    Primary source
    Xenbase:XB-GENE-960988
    Locus tag
    XELAEV_18032091mg
    See related
    EnsemblRapid:ENSXLAG00005016705
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    cpa6; cpah
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    Genomic context

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    See cpa6.L in Genome Data Viewer
    Location:
    chromosome: 6L
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (127567336..127633320, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (120437138..120503400, complement)

    Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor 1 L homeolog Neighboring gene uncharacterized LOC108719285 Neighboring gene uncharacterized LOC121394738 Neighboring gene serine/threonine-protein kinase mig-15-like Neighboring gene uncharacterized LOC121394739

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC53632

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    carboxypeptidase A6 L homeolog
    NP_001080211.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086742.1 → NP_001080211.1  carboxypeptidase A6 L homeolog precursor

      See identical proteins and their annotated locations for NP_001080211.1

      Status: PROVISIONAL

      Source sequence(s)
      BC041315
      UniProtKB/TrEMBL
      A0A974CQ26, B7ZS51, Q8AVS2
      Related
      ENSXLAP00005049171.1, ENSXLAT00005050308.1
      Conserved Domains (2) summary
      pfam02244
      Location:40 → 114
      Propep_M14; Carboxypeptidase activation peptide
      cl11393
      Location:134 → 433
      Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      127567336..127633320 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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