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    Tsp_01381 transcription factor AP-4 [ Trichinella spiralis ]

    Gene ID: 10911263, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Tsp_01381
    Gene description
    transcription factor AP-4
    Locus tag
    Tsp_01381
    Gene type
    protein coding
    RNA name
    transcription factor AP-4
    RefSeq status
    PROVISIONAL
    Organism
    Trichinella spiralis (strain: ISS 195)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003526943.1Genomic Context describing neighboring genes Neighboring gene putative extracellular protein Neighboring gene hypothetical protein Neighboring gene putative IS element transposase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003526943.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    transcription factor AP-4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003526943.1 Reference assembly

      Range
      5510818..5511657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003377130.1 → XP_003377178.1  transcription factor AP-4 [Trichinella spiralis]

      See identical proteins and their annotated locations for XP_003377178.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E5SCC0
      Conserved Domains (1) summary
      pfam00010
      Location:85 → 125
      HLH; Helix-loop-helix DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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