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    Ube2i ubiquitin conjugating enzyme E2 I [ Mesocricetus auratus (golden hamster) ]

    Gene ID: 101843247, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Ube2i
    Gene description
    ubiquitin conjugating enzyme E2 I
    See related
    EnsemblRapid:ENSMAUG00000019217
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mesocricetus auratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
    Also known as
    UBC9
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429191.1 (10082078..10098676, complement)
    102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801720.1 (1750183..1766795)

    NW_024429191.1Genomic Context describing neighboring genes Neighboring gene unk like zinc finger Neighboring gene N-acetylglucosamine-1-phosphate transferase subunit gamma Neighboring gene BAI1 associated protein 3 Neighboring gene TSR3 ribosome maturation factor Neighboring gene mastin Neighboring gene small nucleolar RNA SNORA70

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein-protein interactions in the synaptonemal complex. Tarsounas M, et al. Mol Biol Cell, 1997 Aug. PMID 9285814, Free PMC Article
    2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SUMO conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein sumoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SUMO-conjugating enzyme UBC9
    Names
    RING-type E3 SUMO transferase UBC9
    SUMO-protein ligase
    Ubiquitin carrier protein 9
    Ubiquitin carrier protein I
    Ubiquitin-conjugating enzyme E2 I
    Ubiquitin-protein ligase I
    NP_001268336.1
    XP_012977023.1
    XP_021089423.1
    XP_040603842.1
    XP_040603843.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001281407.1 → NP_001268336.1  SUMO-conjugating enzyme UBC9

      See identical proteins and their annotated locations for NP_001268336.1

      Status: PROVISIONAL

      Source sequence(s)
      AF004814
      UniProtKB/Swiss-Prot
      O09181
      UniProtKB/TrEMBL
      A0A1U7Q231
      Conserved Domains (2) summary
      COG5078
      Location:1 → 155
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      pfam00179
      Location:8 → 152
      UQ_con; Ubiquitin-conjugating enzyme

    RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCM_Maur_2.0 Primary Assembly

    Genomic

    1. NW_024429191.1 Reference BCM_Maur_2.0 Primary Assembly

      Range
      10082078..10098676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013121569.3 → XP_012977023.1  SUMO-conjugating enzyme UBC9 isoform X1

      See identical proteins and their annotated locations for XP_012977023.1

      UniProtKB/TrEMBL
      A0A1U8CMQ1
      Related
      ENSMAUP00000021498.1, ENSMAUT00000025494.2
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 152
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_040747908.1 → XP_040603842.1  SUMO-conjugating enzyme UBC9 isoform X1

      UniProtKB/TrEMBL
      A0A1U8CMQ1
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 152
      UQ_con; Ubiquitin-conjugating enzyme

    3. XM_040747909.1 → XP_040603843.1  SUMO-conjugating enzyme UBC9 isoform X1

      UniProtKB/TrEMBL
      A0A1U8CMQ1
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 152
      UQ_con; Ubiquitin-conjugating enzyme

    4. XM_021233764.1 → XP_021089423.1  SUMO-conjugating enzyme UBC9 isoform X1

      UniProtKB/TrEMBL
      A0A1U8CMQ1
      Conserved Domains (1) summary
      pfam00179
      Location:8 → 152
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O09181.1 GenPept UniProtKB/Swiss-Prot:O09181

    Gene LinkOut

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