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    MANBA mannosidase beta [ Capra hircus (goat) ]

    Gene ID: 100750234, updated on 8-Mar-2024

    Summary

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    Gene symbol
    MANBA
    Gene description
    mannosidase beta
    See related
    EnsemblRapid:ENSCHIG00000020841
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Capra hircus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    102 current ASM170441v1 (GCF_001704415.1) 6 NC_030813.1 (22343643..22463244)
    101 previous assembly CHIR_1.0 (GCF_000317765.1) 6 NC_022298.1 (20417830..20535046)

    Chromosome 6 - NC_030813.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108636209 Neighboring gene CDGSH iron sulfur domain 2 Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Caprine beta-mannosidase: sequencing and characterization of the cDNA and identification of the molecular defect of caprine beta-mannosidosis. Leipprandt JR, et al. Genomics, 1996 Oct 1. PMID 8921369

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycoprotein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-mannosidase
    Names
    lysosomal beta A mannosidase
    mannanase
    mannase
    mannosidase, beta A, lysosomal
    NP_001272620.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001285691.1 → NP_001272620.1  beta-mannosidase precursor

      See identical proteins and their annotated locations for NP_001272620.1

      Status: PROVISIONAL

      Source sequence(s)
      U46067
      UniProtKB/Swiss-Prot
      Q95327
      UniProtKB/TrEMBL
      A0A452FFP6
      Related
      ENSCHIP00000023174.1, ENSCHIT00000031035.2
      Conserved Domains (3) summary
      COG3250
      Location:23 → 694
      LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
      pfam02837
      Location:23 → 143
      Glyco_hydro_2_N; Glycosyl hydrolases family 2, sugar binding domain
      cl23725
      Location:343 → 480
      Glyco_hydro_1; Glycosyl hydrolase family 1

    RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM170441v1 Primary Assembly

    Genomic

    1. NC_030813.1 Reference ASM170441v1 Primary Assembly

      Range
      22343643..22463244
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95327.1 GenPept UniProtKB/Swiss-Prot:Q95327

    Gene LinkOut

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