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    Trpc7 transient receptor potential cation channel subfamily C member 7 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100732031, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Trpc7
    Gene description
    transient receptor potential cation channel subfamily C member 7
    See related
    Ensembl:ENSCPOG00000004430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    TRP7
    Orthologs
    human mouse all
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    Genomic context

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    See Trpc7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947502.1 (32849583..33006906, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176402.1 (24749179..24906906, complement)

    NW_026947502.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 5 Neighboring gene small integral membrane protein 32 Neighboring gene uncharacterized LOC134471634 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for the expression of transient receptor potential proteins in guinea pig airway smooth muscle cells. Ong HL, et al. Respirology, 2003 Mar. PMID 12856738

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in single fertilization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947502.1 Reference mCavPor4.1

      Range
      32849583..33006906 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003473173.5 → XP_003473221.2  short transient receptor potential channel 7

      UniProtKB/TrEMBL
      A0A286XP67, H0V352
      Related
      ENSCPOP00000027193.1
      Conserved Domains (5) summary
      cd00204
      Location:51 → 184
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:27 → 822
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:198 → 256
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]
      cl00511
      Location:582 → 665
      FTSW_RODA_SPOVE; Cell cycle protein
    Nucleotide Protein
    Heading Accession and Version

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