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    Spi1 Spi-1 proto-oncogene [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100727094, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Spi1
    Gene description
    Spi-1 proto-oncogene
    See related
    Ensembl:ENSCPOG00000022138
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (43752653..43764397, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176347.1 (6629697..6641426, complement)

    NW_026947500.1Genomic Context describing neighboring genes Neighboring gene MAP kinase activating death domain Neighboring gene myosin binding protein C3 Neighboring gene uncharacterized LOC106026556 Neighboring gene solute carrier family 39 member 13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor PU.1
    Names
    spleen focus forming virus (SFFV) proviral integration oncogene spi1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947500.1 Reference mCavPor4.1

      Range
      43752653..43764397 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063227929.1 → XP_063083999.1  transcription factor PU.1 isoform X1

    2. XM_003465148.5 → XP_003465196.2  transcription factor PU.1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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