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    Mtm1 myotubularin 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100722582, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Mtm1
    Gene description
    myotubularin 1
    See related
    Ensembl:ENSCPOG00000005458
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947486.1 (117200424..117302752)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176245.1 (1490919..1593322)

    NW_026947486.1Genomic Context describing neighboring genes Neighboring gene mastermind like domain containing 1 Neighboring gene uncharacterized LOC106028262 Neighboring gene uncharacterized LOC134475391 Neighboring gene myotubularin related protein 1 Neighboring gene CD99 molecule like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrion distribution IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle cell cellular homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotubularin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947486.1 Reference mCavPor4.1

      Range
      117200424..117302752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003461695.5 → XP_003461743.2  myotubularin isoform X1

      UniProtKB/TrEMBL
      A0A286Y2W9, H0V5I2
      Related
      ENSCPOP00000031855.1
      Conserved Domains (2) summary
      cd13355
      Location:43 → 142
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:149 → 482
      Myotub-related; Myotubularin-like phosphatase domain

    2. XM_013155525.3 → XP_013010979.1  myotubularin isoform X2

      UniProtKB/TrEMBL
      H0V5I2
      Conserved Domains (2) summary
      cd13355
      Location:43 → 142
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:149 → 482
      Myotub-related; Myotubularin-like phosphatase domain

    3. XM_063246521.1 → XP_063102591.1  myotubularin isoform X1

      UniProtKB/TrEMBL
      A0A286Y2W9

    4. XM_063246520.1 → XP_063102590.1  myotubularin isoform X3

    Nucleotide Protein
    Heading Accession and Version

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