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    DEFB119 defensin beta 119 [ Equus caballus (horse) ]

    Gene ID: 100630303, updated on 8-Mar-2024

    Summary

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    Gene symbol
    DEFB119
    Gene description
    defensin beta 119
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 22 NC_009165.3 (23093906..23104038, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 22 NC_009165.2 (22465941..22475997, complement)

    Chromosome 22 - NC_009165.3Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF14-like Neighboring gene defensin beta 118 Neighboring gene defensin beta 121 Neighboring gene uncharacterized LOC106782435

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipopolysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antifungal innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to Gram-negative bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to Gram-positive bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-defensin 119

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009165.3 Reference EquCab3.0 Primary Assembly

      Range
      23093906..23104038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003363904.4 → XP_003363952.1  beta-defensin 119 isoform X3

      UniProtKB/TrEMBL
      F6T6L6
      Conserved Domains (1) summary
      pfam13841
      Location:27 → 55
      Defensin_beta_2; Beta defensin

    2. XM_005604545.3 → XP_005604602.1  beta-defensin 119 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2H9R4
      Conserved Domains (1) summary
      pfam13841
      Location:22 → 49
      Defensin_beta_2; Beta defensin

    3. XM_014735270.2 → XP_014590756.1  beta-defensin 119 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2H9R4
      Conserved Domains (1) summary
      pfam13841
      Location:23 → 50
      Defensin_beta_2; Beta defensin
    Nucleotide Protein
    Heading Accession and Version

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