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    HTR3B 5-hydroxytryptamine receptor 3B [ Sus scrofa (pig) ]

    Gene ID: 100625976, updated on 8-Mar-2024

    Summary

    Official Symbol
    HTR3Bprovided by VGNC
    Official Full Name
    5-hydroxytryptamine receptor 3Bprovided by VGNC
    Primary source
    VGNC:VGNC:89001
    See related
    Ensembl:ENSSSCG00000015053
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (41512467..41556912)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (46329503..46371073)

    Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 28 Neighboring gene uncharacterized LOC102166826 Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene uncharacterized LOC110255433

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    5-hydroxytryptamine receptor 3B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

      Range
      41512467..41556912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021062866.1XP_020918525.1  5-hydroxytryptamine receptor 3B

      UniProtKB/TrEMBL
      A0A4X1T4T1, A0A8D0UNG8, F1SM64
      Related
      ENSSSCP00000015978.4, ENSSSCT00000016419.5
      Conserved Domains (1) summary
      cl27321
      Location:3431
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain