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    CAMKV CaM kinase like vesicle associated [ Sus scrofa (pig) ]

    Gene ID: 100623981, updated on 8-Mar-2024

    Summary

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    Official Symbol
    CAMKVprovided by VGNC
    Official Full Name
    CaM kinase like vesicle associatedprovided by VGNC
    Primary source
    VGNC:VGNC:86160
    See related
    Ensembl:ENSSSCG00000025416
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in mixtures (RPKM 1.1), ovary (RPKM 0.4) and 3 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (32381122..32401480, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (35561866..35573720, complement)

    Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene inka box actin regulator 1 Neighboring gene uncharacterized LOC106505605 Neighboring gene ubiquitin like modifier activating enzyme 7 Neighboring gene TRAF interacting protein Neighboring gene macrophage stimulating 1 receptor Neighboring gene MON1 homolog A, secretory trafficking associated

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calmodulin-dependent protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caM kinase-like vesicle-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

      Range
      32381122..32401480 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003358469.4 → XP_003358517.1  caM kinase-like vesicle-associated protein isoform X2

      UniProtKB/TrEMBL
      A0A4X1SQB7, A0A8W4FQQ4
      Related
      ENSSSCP00000080750.1, ENSSSCT00000102338.1
      Conserved Domains (4) summary
      smart00220
      Location:24 → 286
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      smart01104
      Location:366 → 479
      CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
      cd14088
      Location:22 → 286
      STKc_CaMK_like; Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases
      pfam16617
      Location:383 → 469
      INTAP; Intersectin and clathrin adaptor AP2 binding region

    2. XM_013981708.2 → XP_013837162.1  caM kinase-like vesicle-associated protein isoform X1

      UniProtKB/TrEMBL
      A0A8D0PZR1, A0A8D1G369
      Conserved Domains (4) summary
      smart00220
      Location:80 → 342
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      smart01104
      Location:422 → 535
      CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
      cd14088
      Location:78 → 342
      STKc_CaMK_like; Catalytic domain of an Uncharacterized group of Serine/Threonine kinases with similarity to Calcium/calmodulin-dependent protein kinases
      pfam16617
      Location:439 → 525
      INTAP; Intersectin and clathrin adaptor AP2 binding region

    RNA

    1. XR_002337521.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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