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    ALDH3A1 aldehyde dehydrogenase 3 family member A1 [ Sus scrofa (pig) ]

    Gene ID: 100526075, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ALDH3A1provided by VGNC
    Official Full Name
    aldehyde dehydrogenase 3 family member A1provided by VGNC
    Primary source
    VGNC:VGNC:85238
    See related
    Ensembl:ENSSSCG00000018044
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in lung (RPKM 3.1), kidney (RPKM 1.5) and 4 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (59895476..59905900)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (62639844..62660135, complement)

    Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 10 Neighboring gene unc-51 like autophagy activating kinase 2 Neighboring gene uncharacterized LOC106505534 Neighboring gene solute carrier family 47 member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aldehyde dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular aldehyde metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aldehyde dehydrogenase, dimeric NADP-preferring

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

      Range
      59895476..59905900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013981363.2 → XP_013836817.1  aldehyde dehydrogenase, dimeric NADP-preferring

      UniProtKB/TrEMBL
      A0A4X1SZM1, A0A8D1S091, F1SDC4
      Related
      ENSSSCP00000019119.2, ENSSSCT00000019639.3
      Conserved Domains (1) summary
      cd07132
      Location:6 → 447
      ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins
    Nucleotide Protein
    Heading Accession and Version

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