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    WDR26 WD repeat domain 26 [ Sus scrofa (pig) ]

    Gene ID: 100523327, updated on 8-Mar-2024

    Summary

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    Official Symbol
    WDR26provided by VGNC
    Official Full Name
    WD repeat domain 26provided by VGNC
    Primary source
    VGNC:VGNC:95960
    See related
    Ensembl:ENSSSCG00000010849
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in lung (RPKM 14.9), spleen (RPKM 14.3) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (12713528..12756713, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 10 NC_010452.3 (15136567..15179565, complement)

    Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110255641 Neighboring gene cornichon family AMPA receptor auxiliary protein 4 Neighboring gene cornichon family AMPA receptor auxiliary protein 3 Neighboring gene uncharacterized LOC110255642 Neighboring gene uncharacterized LOC106505094

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

      Range
      12713528..12756713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005667933.3 → XP_005667990.2  WD repeat-containing protein 26 isoform X2

      UniProtKB/TrEMBL
      A0A8D1PP54
      Conserved Domains (3) summary
      smart00668
      Location:155 → 214
      CTLH; C-terminal to LisH motif
      cd00200
      Location:332 → 624
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:342 → 382
      7WD40; WD40 repeat [structural motif]

    2. XM_005667934.3 → XP_005667991.2  WD repeat-containing protein 26 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NVW8
      Related
      ENSSSCP00000011568.5, ENSSSCT00000011871.5
      Conserved Domains (3) summary
      smart00668
      Location:155 → 230
      CTLH; C-terminal to LisH motif
      cd00200
      Location:348 → 640
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:358 → 398
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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