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    PLEKHA4 pleckstrin homology domain containing A4 [ Sus scrofa (pig) ]

    Gene ID: 100522871, updated on 8-Mar-2024

    Summary

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    Official Symbol
    PLEKHA4provided by VGNC
    Official Full Name
    pleckstrin homology domain containing A4provided by VGNC
    Primary source
    VGNC:VGNC:91534
    See related
    Ensembl:ENSSSCG00000003137
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 10.6), lung (RPKM 4.5) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (54144016..54170661, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (49891388..49918032, complement)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 21 Neighboring gene branched chain amino acid transaminase 2 Neighboring gene uncharacterized LOC106510565 Neighboring gene hydroxysteroid 17-beta dehydrogenase 14 Neighboring gene protein phosphatase 1 regulatory subunit 15A Neighboring gene TUB like protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      54144016..54170661 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013998606.2 → XP_013854060.2  LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 4

      UniProtKB/TrEMBL
      A0A4X1VUL5
      Related
      ENSSSCP00000003395.5, ENSSSCT00000003478.5
      Conserved Domains (3) summary
      cd13248
      Location:49 → 152
      PH_PEPP1_2_3; Phosphoinositol 3-phosphate binding proteins 1, 2, and 3 pleckstrin homology (PH) domain
      cl25732
      Location:363 → 485
      SMC_N; RecF/RecN/SMC N terminal domain
      cl25751
      Location:495 → 636
      DUF4045; Domain of unknown function (DUF4045)
    Nucleotide Protein
    Heading Accession and Version

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