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    CCDC22 coiled-coil domain containing 22 [ Sus scrofa (pig) ]

    Gene ID: 100512878, updated on 8-Mar-2024

    Summary

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    Official Symbol
    CCDC22provided by VGNC
    Official Full Name
    coiled-coil domain containing 22provided by VGNC
    Primary source
    VGNC:VGNC:86286
    See related
    Ensembl:ENSSSCG00000012297
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 10.4), spleen (RPKM 9.3) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (43285232..43303865)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) X NC_010461.4 (48133195..48151807)

    Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene synaptophysin Neighboring gene calcium voltage-gated channel subunit alpha1 F Neighboring gene forkhead box P3 Neighboring gene protein phosphatase 1 regulatory subunit 3F Neighboring gene non-histone chromosomal protein HMG-14 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

      Range
      43285232..43303865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003135083.5 → XP_003135131.2  coiled-coil domain-containing protein 22

      UniProtKB/TrEMBL
      A0A5G2RD19, A0A8D1PGI7, A0A8D1TN58
      Related
      ENSSSCP00000072212.1, ENSSSCT00000075087.1
      Conserved Domains (1) summary
      pfam05667
      Location:1 → 590
      DUF812; Protein of unknown function (DUF812)
    Nucleotide Protein
    Heading Accession and Version

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