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    LOC100512341 uncharacterized protein FLJ45252 [ Sus scrofa (pig) ]

    Gene ID: 100512341, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC100512341
    Gene description
    uncharacterized protein FLJ45252
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in kidney (RPKM 10.5), heart (RPKM 9.8) and 8 other tissues See more
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (72963478..72971734)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (76229686..76406913)

    Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene AP2 associated kinase 1 Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene Neighboring gene NFU1 iron-sulfur cluster scaffold Neighboring gene glutamine--fructose-6-phosphate transaminase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation of the AP2 mu subunit by AAK1 mediates high affinity binding to membrane protein sorting signals. Ricotta D, et al. J Cell Biol, 2002 Mar 4. PMID 11877457, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    AP2-associated protein kinase 1
    Names
    Adaptor-associated kinase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

      Range
      72963478..72971734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021087411.1 → XP_020943070.1  AP2-associated protein kinase 1

      UniProtKB/TrEMBL
      A0A8D1J934
      Conserved Domains (1) summary
      pfam15282
      Location:85 → 299
      BMP2K_C; BMP-2-inducible protein kinase C-terminus
    Nucleotide Protein
    Heading Accession and Version

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