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    hcrtr2 hypocretin (orexin) receptor 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495420, updated on 8-Mar-2024

    Summary

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    Official Symbol
    hcrtr2provided by Xenbase
    Official Full Name
    hypocretin (orexin) receptor 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-952341
    See related
    Ensembl:ENSXETG00000001622
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    ox2r
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (96096454..96134039, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (88101467..88134327)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 5 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase like 1 Neighboring gene GDNF family receptor alpha like Neighboring gene family with sequence similarity 83 member B Neighboring gene muscular LMNA-interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables orexin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within circadian sleep/wake cycle process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within feeding behavior IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    orexin receptor type 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      96096454..96134039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002934850.5 → XP_002934896.3  orexin receptor type 2

      UniProtKB/TrEMBL
      A0A6I8Q0I7, F6RCR3
      Related
      ENSXETP00000003414.3, ENSXETT00000003414.3
      Conserved Domains (2) summary
      cd15208
      Location:69 → 388
      7tmA_OXR; orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
      pfam03827
      Location:400 → 456
      Orexin_rec2; Orexin receptor type 2
    Nucleotide Protein Strain
    Heading Accession and Version

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