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    tgm5 transglutaminase 5 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486682, updated on 7-Sep-2023

    Summary

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    Official Symbol
    tgm5provided by Xenbase
    Official Full Name
    transglutaminase 5provided by Xenbase
    Primary source
    Xenbase:XB-GENE-986930
    See related
    Ensembl:ENSXETG00000007353
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (18760978..18788437, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (14476401..14503839, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene cyclin D-type binding-protein 1 Neighboring gene Erythrocyte Membrane Protein Band 4.2 Neighboring gene transglutaminase 7 Neighboring gene transglutaminase 3 like, gene 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-glutamine gamma-glutamyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein-glutamine gamma-glutamyltransferase 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      18760978..18788437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031894770.1 → XP_031750630.1  protein-glutamine gamma-glutamyltransferase 5

      UniProtKB/TrEMBL
      F6Z5P5
      Related
      ENSXETP00000016007.5, ENSXETT00000016007.5
    Nucleotide Protein Strain
    Heading Accession and Version

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