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    INTS6L integrator complex subunit 6 like [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100483555, updated on 8-Mar-2024

    Summary

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    Gene symbol
    INTS6L
    Gene description
    integrator complex subunit 6 like
    Locus tag
    PANDA_021070
    See related
    Ensembl:ENSAMEG00000015815
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (97314323..97367691)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219734.1 (42458..95452)

    Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 449-like Neighboring gene zinc finger protein 449 Neighboring gene integrator complex subunit 6-like Neighboring gene uncharacterized LOC117797409

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 6-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048238.1 Reference ASM200744v2 Primary Assembly

      Range
      97314323..97367691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019793345.2 → XP_019648904.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      G1MBI9

    2. XM_019793344.2 → XP_019648903.1  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      A0A7N5K0R3, G1MBI9
      Related
      ENSAMEP00000033327.1, ENSAMET00000036639.1

    3. XM_011217359.3 → XP_011215661.1  integrator complex subunit 6-like isoform X4

      UniProtKB/TrEMBL
      G1MBI9
      Related
      ENSAMEP00000016717.2, ENSAMET00000017407.2
      Conserved Domains (2) summary
      cd00198
      Location:4 → 131
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    4. XM_002930533.4 → XP_002930579.1  integrator complex subunit 6-like isoform X3

      See identical proteins and their annotated locations for XP_002930579.1

      UniProtKB/TrEMBL
      D2I5T0, G1MBI9
      Related
      ENSAMEP00000016716.1, ENSAMET00000017406.2
      Conserved Domains (2) summary
      cd00198
      Location:4 → 131
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    5. XM_034648902.1 → XP_034504793.1  integrator complex subunit 6-like isoform X5

      UniProtKB/TrEMBL
      G1MBI9

    6. XM_019793346.2 → XP_019648905.1  integrator complex subunit 6-like isoform X6

    Nucleotide Protein
    Heading Accession and Version

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