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    HIF3A hypoxia inducible factor 3 subunit alpha [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100473029, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HIF3A
    Gene description
    hypoxia inducible factor 3 subunit alpha
    Locus tag
    PANDA_012188
    See related
    Ensembl:ENSAMEG00000008615
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (32793022..32821581, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217939.1 (1020423..1048785, complement)

    Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene paraneoplastic antigen-like protein 8A Neighboring gene protein phosphatase 5 catalytic subunit Neighboring gene uncharacterized LOC105239255 Neighboring gene 60S ribosomal protein L38-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypoxia-inducible factor 3-alpha
    Names
    hypoxia inducible factor 3 alpha subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048229.1 Reference ASM200744v2 Primary Assembly

      Range
      32793022..32821581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019803597.2 → XP_019659156.2  hypoxia-inducible factor 3-alpha isoform X8

      UniProtKB/TrEMBL
      G1LPW8
      Related
      ENSAMEP00000009098.2, ENSAMET00000009485.2

    2. XM_034672786.1 → XP_034528677.1  hypoxia-inducible factor 3-alpha isoform X3

      UniProtKB/TrEMBL
      G1LPW8

    3. XM_034672790.1 → XP_034528681.1  hypoxia-inducible factor 3-alpha isoform X7

      UniProtKB/TrEMBL
      A0A7N5P994

    4. XM_019803598.2 → XP_019659157.2  hypoxia-inducible factor 3-alpha isoform X9

      UniProtKB/TrEMBL
      A0A7N5P994
      Related
      ENSAMEP00000039232.1, ENSAMET00000044099.1

    5. XM_034672785.1 → XP_034528676.1  hypoxia-inducible factor 3-alpha isoform X2

      UniProtKB/TrEMBL
      G1LPW8

    6. XM_034672791.1 → XP_034528682.1  hypoxia-inducible factor 3-alpha isoform X7

      UniProtKB/TrEMBL
      A0A7N5P994

    7. XM_034672784.1 → XP_034528675.1  hypoxia-inducible factor 3-alpha isoform X1

      UniProtKB/TrEMBL
      G1LPW8

    8. XM_034672787.1 → XP_034528678.1  hypoxia-inducible factor 3-alpha isoform X4

      UniProtKB/TrEMBL
      G1LPW8

    9. XM_034672788.1 → XP_034528679.1  hypoxia-inducible factor 3-alpha isoform X5

      UniProtKB/TrEMBL
      G1LPW8

    10. XM_034672789.1 → XP_034528680.1  hypoxia-inducible factor 3-alpha isoform X6

      UniProtKB/TrEMBL
      G1LPW8
    Nucleotide Protein
    Heading Accession and Version

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