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    ALX1 ALX homeobox 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100464105, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ALX1
    Gene description
    ALX homeobox 1
    Locus tag
    PANDA_016388
    See related
    Ensembl:ENSAMEG00000009049
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See ALX1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 15 NC_048232.1 (57306692..57327778)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218421.1 (505731..526141)

    Chromosome 15 - NC_048232.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 19 Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene RNA-binding protein EWS-like Neighboring gene Ras association domain family member 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in embryonic skeletal system morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ALX homeobox protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048232.1 Reference ASM200744v2 Primary Assembly

      Range
      57306692..57327778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002926650.2 → XP_002926696.2  ALX homeobox protein 1

      UniProtKB/TrEMBL
      D2HVJ0, G1LR28
      Related
      ENSAMEP00000009512.2, ENSAMET00000009923.2
    Nucleotide Protein
    Heading Accession and Version

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