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    XYLT2 xylosyltransferase 2 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100459725, updated on 3-Apr-2024

    Summary

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    Gene symbol
    XYLT2
    Gene description
    xylosyltransferase 2
    Locus tag
    CR201_G0012252
    See related
    Ensembl:ENSPPYG00000008287
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (65686521..65701616, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) Unplaced Scaffold NW_026537337.1 (5923990..5939028, complement)

    Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 59 Neighboring gene essential meiotic structure-specific endonuclease 1 Neighboring gene mitochondrial ribosomal protein L27 Neighboring gene uncharacterized LOC134760488 Neighboring gene uncharacterized LOC103889597 Neighboring gene transmembrane protein 92

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heparan sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylosyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      65686521..65701616 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024235524.3 → XP_024091292.1  xylosyltransferase 2 isoform X1

      UniProtKB/TrEMBL
      A0A2J8W8Q1, A0A2J8W8S8, H2NTN9
      Related
      ENSPPYP00000009312.3
      Conserved Domains (2) summary
      pfam02485
      Location:234 → 486
      Branch; Core-2/I-Branching enzyme
      pfam12529
      Location:519 → 699
      Xylo_C; Xylosyltransferase C terminal

    2. XM_054546586.2 → XP_054402561.1  xylosyltransferase 2 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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