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    TOM1L1 target of myb1 like 1 membrane trafficking protein [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100446539, updated on 3-Apr-2024

    Summary

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    Gene symbol
    TOM1L1
    Gene description
    target of myb1 like 1 membrane trafficking protein
    Locus tag
    CR201_G0012183
    See related
    Ensembl:ENSPPYG00000025942
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (60917657..60984846, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) Unplaced Scaffold NW_026537337.1 (1138187..1203206, complement)

    Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene HLF transcription factor, PAR bZIP family member Neighboring gene syntaxin binding protein 4 Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene uncharacterized LOC129054921 Neighboring gene ADP-ribosylation factor-like protein 2-binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TOM1-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      60917657..60984846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063718129.1 → XP_063574199.1  TOM1-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8W858, H2PXS0

    2. XM_063718128.1 → XP_063574198.1  TOM1-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8W858, H2PXS0

    3. XM_063718131.1 → XP_063574201.1  TOM1-like protein 1 isoform X6

    4. XM_063718130.1 → XP_063574200.1  TOM1-like protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A2J8W869

    5. XM_054546267.2 → XP_054402242.2  TOM1-like protein 1 isoform X1

    6. XM_054546274.2 → XP_054402249.2  TOM1-like protein 1 isoform X4

    7. XM_054546273.2 → XP_054402248.2  TOM1-like protein 1 isoform X4

    8. XM_054546270.2 → XP_054402245.2  TOM1-like protein 1 isoform X3

    RNA

    1. XR_010137964.1 RNA Sequence

    2. XR_008519531.2 RNA Sequence

    3. XR_010137965.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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