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    LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100435855, updated on 26-Mar-2024

    Summary

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    Gene symbol
    LPCAT1
    Gene description
    lysophosphatidylcholine acyltransferase 1
    Locus tag
    CR201_G0033763
    See related
    Ensembl:ENSPPYG00000015319
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See LPCAT1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (1422898..1486627, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (1422901..1486603, complement)

    Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene CLPTM1 like Neighboring gene solute carrier family 6 member 3 Neighboring gene uncharacterized LOC134761372 Neighboring gene uncharacterized LOC134761374 Neighboring gene succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lysophosphatidic acid acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysophosphatidylcholine acyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      1422898..1486627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002815391.4 → XP_002815437.1  lysophosphatidylcholine acyltransferase 1

      UniProtKB/TrEMBL
      A0A2J8TLW6, A0A6D2Y5G0, H2PF43
      Related
      ENSPPYP00000017114.2
      Conserved Domains (3) summary
      cd07991
      Location:103 → 314
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:386 → 415
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:349 → 485
      EFh_PEF; The penta-EF hand (PEF) family
    Nucleotide Protein
    Heading Accession and Version

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