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    RBBP7 RB binding protein 7, chromatin remodeling factor [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100414385, updated on 8-Mar-2024

    Summary

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    Gene symbol
    RBBP7
    Gene description
    RB binding protein 7, chromatin remodeling factor
    See related
    Ensembl:ENSCJAG00000004545
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (15635472..15659200, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (15435819..15459601, complement)

    Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene synapse associated protein 1 Neighboring gene uncharacterized LOC108589844 Neighboring gene taxilin gamma Neighboring gene U4 spliceosomal RNA Neighboring gene solute carrier family 35 member C2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
    2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESC/E(Z) complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NuRD complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-binding protein RBBP7
    Names
    histone binding protein RBBP7-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071464.1 Reference mCalJa1.2.pat.X

      Range
      15635472..15659200 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002762663.4 → XP_002762709.1  histone-binding protein RBBP7

      See identical proteins and their annotated locations for XP_002762709.1

      UniProtKB/TrEMBL
      A0A2R8N0V5, F7HWQ2, U3DYI2
      Related
      ENSCJAP00000008329.1
      Conserved Domains (3) summary
      sd00039
      Location:127 → 174
      7WD40; WD40 repeat [structural motif]
      pfam12265
      Location:18 → 87
      CAF1C_H4-bd; Histone-binding protein RBBP4 or subunit C of CAF1 complex
      cl29593
      Location:122 → 402
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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