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    BTBD2 BTB domain containing 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100404380, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BTBD2
    Gene description
    BTB domain containing 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 22
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (1638245..1662811, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (1615816..1641104, complement)

    Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene secretory carrier membrane protein 4 Neighboring gene adenosine deaminase tRNA specific 3 Neighboring gene uncharacterized LOC118150086 Neighboring gene casein kinase 1 gamma 2 Neighboring gene MAPK interacting serine/threonine kinase 2 Neighboring gene collagen alpha-1(III) chain-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071463.1 Reference mCalJa1.2.pat.X

      Range
      1638245..1662811 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054250433.1 → XP_054106408.1  BTB/POZ domain-containing protein 2 isoform X2

    2. XM_035287346.2 → XP_035143237.1  BTB/POZ domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      F7ILP5
      Conserved Domains (3) summary
      cd18281
      Location:96 → 222
      BTB_POZ_BTBD1_2; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing proteins, BTBD1 and BTBD2
      cd18523
      Location:218 → 323
      BACK_BTBD2; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 2 (BTBD2)
      pfam08005
      Location:376 → 525
      PHR; PHR domain

    3. XM_054250432.1 → XP_054106407.1  BTB/POZ domain-containing protein 2 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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