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    amotl2 angiomotin like 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100379727, updated on 8-Mar-2024

    Summary

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    Official Symbol
    amotl2provided by Xenbase
    Official Full Name
    angiomotin like 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-972335
    See related
    Ensembl:ENSXETG00000011819
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (130244940..130256808, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (126596432..126608302, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene receptor like tyrosine kinase Neighboring gene meiotic meta-phase expressing gene in spermatogenesis Neighboring gene kyphoscoliosis peptidase Neighboring gene centrosomal protein 63kDa

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    angiomotin-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      130244940..130256808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002935086.5 → XP_002935132.3  angiomotin-like protein 2

      UniProtKB/TrEMBL
      A0A8J1JKT0, F6SBP4
      Conserved Domains (2) summary
      TIGR02168
      Location:259 → 497
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam12240
      Location:417 → 611
      Angiomotin_C; Angiomotin C terminal

    2. XM_031902624.1 → XP_031758484.1  angiomotin-like protein 2

      UniProtKB/TrEMBL
      A0A8J1JKT0, F6SBP4
      Related
      ENSXETP00000025845.4, ENSXETT00000025845.4
      Conserved Domains (2) summary
      TIGR02168
      Location:259 → 497
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam12240
      Location:417 → 611
      Angiomotin_C; Angiomotin C terminal
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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