U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    AATF apoptosis antagonizing transcription factor [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100356226, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    AATF
    Gene description
    apoptosis antagonizing transcription factor
    See related
    Ensembl:ENSOCUG00000014434
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 19
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (23435956..23559770, complement)

    Chromosome 19 - NC_067392.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103351525 Neighboring gene transcriptional adaptor 2A Neighboring gene chromosome 19 C17orf78 homolog Neighboring gene acetyl-CoA carboxylase alpha Neighboring gene uncharacterized LOC127484374 Neighboring gene LIM homeobox 1 Neighboring gene mitochondrial rRNA methyltransferase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein AATF

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      23435956..23559770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008271166.3 → XP_008269388.1  protein AATF isoform X2

      UniProtKB/TrEMBL
      G1T7E3
      Related
      ENSOCUP00000012412.3
      Conserved Domains (2) summary
      pfam08164
      Location:473 → 557
      TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
      pfam13339
      Location:231 → 382
      AATF-Che1; Apoptosis antagonizing transcription factor

    2. XM_051824701.1 → XP_051680661.1  protein AATF isoform X3

    3. XM_051824700.1 → XP_051680660.1  protein AATF isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.