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    ZFYVE27 zinc finger FYVE-type containing 27 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100354464, updated on 11-Apr-2024

    Summary

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    Gene symbol
    ZFYVE27
    Gene description
    zinc finger FYVE-type containing 27
    See related
    Ensembl:ENSOCUG00000001352
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 18 NC_067391.1 (42797260..42821808)

    Chromosome 18 - NC_067391.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103351402 Neighboring gene arginine vasopressin induced 1 Neighboring gene MARVEL domain containing 1 Neighboring gene secreted frizzled related protein 5 Neighboring gene 60S ribosomal protein L27-like Neighboring gene golgin A7 family member B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067391.1 Chromosome 18 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum tubular network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotrophin TRK receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of axon extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum tubular network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in growth cone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protrudin
    Names
    zinc finger, FYVE domain containing 27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067391.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      42797260..42821808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051824046.1 → XP_051680006.1  protrudin isoform X5

    2. XM_008270307.3 → XP_008268529.1  protrudin isoform X1

      See identical proteins and their annotated locations for XP_008268529.1

      UniProtKB/TrEMBL
      A0A5F9CPZ4, G1SF92
      Conserved Domains (1) summary
      cd15723
      Location:354 → 414
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    3. XM_051824047.1 → XP_051680007.1  protrudin isoform X6

    4. XM_008270306.3 → XP_008268528.1  protrudin isoform X1

      See identical proteins and their annotated locations for XP_008268528.1

      UniProtKB/TrEMBL
      A0A5F9CPZ4, G1SF92
      Conserved Domains (1) summary
      cd15723
      Location:354 → 414
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    5. XM_008270308.3 → XP_008268530.1  protrudin isoform X3

      UniProtKB/TrEMBL
      A0A5F9CPZ4
      Conserved Domains (1) summary
      cd15723
      Location:347 → 407
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    6. XM_002718607.4 → XP_002718653.1  protrudin isoform X2

      UniProtKB/TrEMBL
      A0A5F9CPZ4
      Conserved Domains (1) summary
      cd15723
      Location:349 → 409
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    7. XM_002718608.4 → XP_002718654.1  protrudin isoform X4

      UniProtKB/TrEMBL
      A0A5F9CPZ4, U3KPG0
      Related
      ENSOCUP00000027120.2
      Conserved Domains (1) summary
      cd15723
      Location:342 → 402
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    8. XM_017348474.2 → XP_017203963.1  protrudin isoform X1

      UniProtKB/TrEMBL
      A0A5F9CPZ4, G1SF92
      Related
      ENSOCUP00000001165.2
      Conserved Domains (1) summary
      cd15723
      Location:354 → 414
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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