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    srpk3.S SRSF protein kinase 3 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100329198, updated on 11-Apr-2024

    Summary

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    Official Symbol
    srpk3.S
    Official Full Name
    SRSF protein kinase 3 S homeolog
    Primary source
    Xenbase:XB-GENE-1010995
    Locus tag
    XELAEV_18020978mg
    See related
    EnsemblRapid:ENSXLAG00005008205
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    mssk1; srpk3; stk23; srpk2a
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    Genomic context

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    Location:
    chromosome: 3S
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (73054180..73133657, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (71643559..71723518, complement)

    Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108713074 Neighboring gene lysine (K)-specific methyltransferase 2E S homeolog Neighboring gene ataxin 7-like 1 S homeolog Neighboring gene microspherule protein 1 S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within spliceosomal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SRSF protein kinase 3 S homeolog
    Names
    SFRS protein kinase 2a
    SFRS protein kinase 3
    NP_001165329.1
    XP_018109497.1
    XP_018109498.1
    XP_018109499.1
    XP_018109500.1
    XP_018109502.1
    XP_018109503.1
    XP_018109507.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001171858.1 → NP_001165329.1  SRSF protein kinase 3 S homeolog

      Status: PROVISIONAL

      Source sequence(s)
      BC084342, CA974578
      UniProtKB/TrEMBL
      A0A8J0QFG8, A0A974D9K6
      Conserved Domains (2) summary
      cd14217
      Location:64 → 252
      STKc_SRPK2; Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 2
      cl21453
      Location:515 → 693
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      73054180..73133657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018254010.2 → XP_018109499.1  SRSF protein kinase 3 S homeolog isoform X3

      UniProtKB/TrEMBL
      A0A8J0USV6, A0A974D9K6
      Related
      ENSXLAP00005023640.1, ENSXLAT00005024345.1

    2. XM_018254008.2 → XP_018109497.1  SRSF protein kinase 3 S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J0UTY8, A0A974D9K6

    3. XM_018254009.2 → XP_018109498.1  SRSF protein kinase 3 S homeolog isoform X2

      UniProtKB/TrEMBL
      A0A8J0UM10, A0A974D9K6

    4. XM_018254013.2 → XP_018109502.1  SRSF protein kinase 3 S homeolog isoform X6

      UniProtKB/TrEMBL
      A0A8J0UXD6, A0A974D9K6
      Related
      ENSXLAP00005023656.1, ENSXLAT00005024361.1

    5. XM_018254014.2 → XP_018109503.1  SRSF protein kinase 3 S homeolog isoform X5

      UniProtKB/TrEMBL
      A0A8J0UTZ5, A0A974D9K6
      Related
      ENSXLAP00005023616.1, ENSXLAT00005024322.1

    6. XM_018254011.2 → XP_018109500.1  SRSF protein kinase 3 S homeolog isoform X4

      UniProtKB/TrEMBL
      A0A8J0UU32, A0A974D9K6
      Related
      ENSXLAP00005023589.1, ENSXLAT00005024294.1

    7. XM_018254018.2 → XP_018109507.1  SRSF protein kinase 3 S homeolog isoform X7

      UniProtKB/TrEMBL
      A0A8J0UM16, A0A974D9K6
      Related
      ENSXLAP00005023575.1, ENSXLAT00005024280.1
    Nucleotide Protein Strain
    Heading Accession and Version

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