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    ube2o ubiquitin conjugating enzyme E2 O [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100327234, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ube2oprovided by Xenbase
    Official Full Name
    ubiquitin conjugating enzyme E2 Oprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-877047
    See related
    Ensembl:ENSXETG00000034090
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    e2-230k
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (45256115..45273140, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (36654277..36674011, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene sphingosine kinase 1 Neighboring gene uncharacterized LOC105945233 Neighboring gene aralkylamine N-acetyltransferase Neighboring gene rhomboid 5 homolog 2 Neighboring gene extended synaptotagmin-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    (E3-independent) E2 ubiquitin-conjugating enzyme
    Names
    ubiquitin conjugating enzyme E2O

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      45256115..45273140 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031894223.1 → XP_031750083.1  (E3-independent) E2 ubiquitin-conjugating enzyme isoform X2

      UniProtKB/TrEMBL
      A0A6I8RX81, A0A8J1IX07
      Conserved Domains (1) summary
      cd00195
      Location:885 → 1035
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

    2. XM_031894224.1 → XP_031750084.1  (E3-independent) E2 ubiquitin-conjugating enzyme isoform X3

      UniProtKB/TrEMBL
      A0A6I8RX81, A0A8J1IWV8
      Conserved Domains (1) summary
      cd00195
      Location:939 → 1089
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

    3. XM_031894222.1 → XP_031750082.1  (E3-independent) E2 ubiquitin-conjugating enzyme isoform X1

      UniProtKB/TrEMBL
      A0A6I8RX81, A0A8J1IWU9
      Related
      ENSXETP00000087307.2, ENSXETT00000092038.2
      Conserved Domains (1) summary
      cd00195
      Location:935 → 1085
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    Nucleotide Protein Strain
    Heading Accession and Version

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