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    CNGB3 cyclic nucleotide gated channel subunit beta 3 [ Ovis aries (sheep) ]

    Gene ID: 100233165, updated on 11-Apr-2024

    Summary

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    Gene symbol
    CNGB3
    Gene description
    cyclic nucleotide gated channel subunit beta 3
    See related
    EnsemblRapid:ENSOARG00020006242
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 9 NC_056062.1 (88859537..89042610)

    Chromosome 9 - NC_056062.1Genomic Context describing neighboring genes Neighboring gene nucleolar RNA helicase 2-like Neighboring gene cyclic nucleotide binding domain containing 1 Neighboring gene ornithine decarboxylase-like Neighboring gene copine 3 Neighboring gene regulator of microtubule dynamics 1 Neighboring gene WW domain containing E3 ubiquitin protein ligase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056062.1 Chromosome 9 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A mutation in gene CNGA3 is associated with day blindness in sheep. Reicher S, et al. Genomics, 2010 Feb. PMID 19874885

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cGMP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intracellularly cAMP-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intracellularly cGMP-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of intracellular cyclic nucleotide activated cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic nucleotide-gated cation channel beta-3
    Names
    cyclic nucleotide gated channel beta 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001143664.1 → NP_001137136.1  cyclic nucleotide-gated cation channel beta-3

      See identical proteins and their annotated locations for NP_001137136.1

      Status: PROVISIONAL

      Source sequence(s)
      FM946177
      UniProtKB/TrEMBL
      A0A6P3CX71, A0A836CZD7, B7VGH2
      Related
      ENSOARP00020008062.2, ENSOART00020009752.2
      Conserved Domains (3) summary
      COG0664
      Location:502 → 621
      Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
      cd00038
      Location:505 → 614
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:219 → 434
      Ion_trans; Ion transport protein

    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056062.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      88859537..89042610
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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