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    BOC BOC cell adhesion associated, oncogene regulated [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100226489, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BOC
    Gene description
    BOC cell adhesion associated, oncogene regulated
    See related
    Ensembl:ENSTGUG00000013417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 1 NC_044211.2 (20785217..20839563)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1 NC_044998.1 (20561084..20615105)

    Chromosome 1 - NC_044211.2Genomic Context describing neighboring genes Neighboring gene protein spire homolog 1 Neighboring gene nucleolus and neural progenitor protein Neighboring gene cilia and flagella associated protein 44 Neighboring gene immunoglobulin like domain containing receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brother of CDO
    Names
    Boc homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_044211.2 Reference bTaeGut1.4.pri Primary Assembly

      Range
      20785217..20839563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030265638.3 → XP_030121498.3  brother of CDO

      UniProtKB/TrEMBL
      H0ZT69
      Conserved Domains (5) summary
      smart00408
      Location:241 → 302
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:133 → 208
      IG; Immunoglobulin
      cd00063
      Location:601 → 688
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:244 → 248
      Ig; Ig strand B [structural motif]
      cl11960
      Location:46 → 109
      Ig; Immunoglobulin domain

    2. XM_030265645.3 → XP_030121505.3  brother of CDO

      UniProtKB/TrEMBL
      H0ZT69
      Conserved Domains (5) summary
      smart00408
      Location:241 → 302
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:133 → 208
      IG; Immunoglobulin
      cd00063
      Location:601 → 688
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:244 → 248
      Ig; Ig strand B [structural motif]
      cl11960
      Location:46 → 109
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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