U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PSMD8 proteasome 26S subunit, non-ATPase 8 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100171816, updated on 26-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PSMD8
    Gene description
    proteasome 26S subunit, non-ATPase 8
    Locus tag
    CR201_G0051524
    See related
    Ensembl:ENSPPYG00000009931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PSMD8 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 20 NC_072005.2 (43976234..43986064)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 19 NC_072004.1 (50320630..50330099)

    Chromosome 20 - NC_072005.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129051961 Neighboring gene potassium two pore domain channel subfamily K member 6 Neighboring gene cation channel sperm associated auxiliary subunit gamma Neighboring gene small nucleolar RNA U13 Neighboring gene gametogenetin Neighboring gene sprouty related EVH1 domain containing 3 Neighboring gene family with sequence similarity 98 member C

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • DKFZp469E0335

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome regulatory particle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome regulatory particle, lid subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    26S proteasome non-ATPase regulatory subunit 8
    Names
    26S proteasome regulatory subunit RPN12
    proteasome (prosome, macropain) 26S subunit, non-ATPase, 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072005.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      43976234..43986064
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003779173.5 → XP_003779221.2  26S proteasome non-ATPase regulatory subunit 8

      UniProtKB/Swiss-Prot
      Q5RE15
      UniProtKB/TrEMBL
      A0A2J8RE46, H2NYN7
      Related
      ENSPPYP00000011119.3
      Conserved Domains (1) summary
      pfam10075
      Location:201 → 315
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001131472.1: Suppressed sequence

      Description
      NM_001131472.1: This RefSeq was temporarily suppressed because the CDS was partial.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5RE15.2 GenPept UniProtKB/Swiss-Prot:Q5RE15

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous