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    foxl1 forkhead box L1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 100144369, updated on 8-Mar-2024

    Summary

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    Gene symbol
    foxl1
    Gene description
    forkhead box L1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    zebrafish all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 6 NC_019864.2 (26290531..26292282)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 6 NC_019864.1 (21445927..21447678)

    Chromosome 6 - NC_019864.2Genomic Context describing neighboring genes Neighboring gene gigaxonin Neighboring gene ACD shelterin complex subunit and telomerase recruitment factor Neighboring gene KIAA0513 ortholog Neighboring gene carboxylesterase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein L1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122919.2 → NP_001116391.1  forkhead box protein L1

      See identical proteins and their annotated locations for NP_001116391.1

      Status: PROVISIONAL

      Source sequence(s)
      EF577483
      UniProtKB/TrEMBL
      A0A3P9ME18, A9Q6B1, H2MFM9
      Conserved Domains (1) summary
      pfam00250
      Location:50 → 136
      Forkhead; Forkhead domain

    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019864.2 Reference ASM223467v1 Primary Assembly

      Range
      26290531..26292282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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