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    USP53 ubiquitin specific peptidase 53 [ Equus caballus (horse) ]

    Gene ID: 100072411, updated on 8-Mar-2024

    Summary

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    Official Symbol
    USP53provided by VGNC
    Official Full Name
    ubiquitin specific peptidase 53provided by VGNC
    Primary source
    VGNC:VGNC:24852
    See related
    Ensembl:ENSECAG00000016383
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See USP53 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (108592857..108654640, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (108250578..108312237, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene chromosome 2 C4orf3 homolog Neighboring gene fatty acid binding protein 2 Neighboring gene myozenin 2 Neighboring gene synaptopodin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to auditory stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of sound IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive ubiquitin carboxyl-terminal hydrolase 53

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      108592857..108654640 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023636639.1 → XP_023492407.1  inactive ubiquitin carboxyl-terminal hydrolase 53

      UniProtKB/TrEMBL
      F6XR25
      Conserved Domains (1) summary
      pfam00443
      Location:31 → 348
      UCH; Ubiquitin carboxyl-terminal hydrolase

    2. XM_001916288.5 → XP_001916323.3  inactive ubiquitin carboxyl-terminal hydrolase 53

      UniProtKB/TrEMBL
      F6XR25
      Related
      ENSECAP00000072319.1, ENSECAT00000119186.1
      Conserved Domains (1) summary
      pfam00443
      Location:31 → 348
      UCH; Ubiquitin carboxyl-terminal hydrolase

    3. XM_023636637.1 → XP_023492405.1  inactive ubiquitin carboxyl-terminal hydrolase 53

      UniProtKB/TrEMBL
      F6XR25
      Conserved Domains (1) summary
      pfam00443
      Location:31 → 348
      UCH; Ubiquitin carboxyl-terminal hydrolase

    4. XM_023636638.1 → XP_023492406.1  inactive ubiquitin carboxyl-terminal hydrolase 53

      UniProtKB/TrEMBL
      F6XR25
      Conserved Domains (1) summary
      pfam00443
      Location:31 → 348
      UCH; Ubiquitin carboxyl-terminal hydrolase
    Nucleotide Protein
    Heading Accession and Version

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