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    CADM4 cell adhesion molecule 4 [ Equus caballus (horse) ]

    Gene ID: 100070257, updated on 8-Mar-2024

    Summary

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    Official Symbol
    CADM4provided by VGNC
    Official Full Name
    cell adhesion molecule 4provided by VGNC
    Primary source
    VGNC:VGNC:16001
    See related
    Ensembl:ENSECAG00000013952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (14775193..14789910, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 10 NC_009153.2 (14612478..14622098, complement)

    Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 576 Neighboring gene zinc finger protein 428 Neighboring gene plasminogen activator, urokinase receptor Neighboring gene uncharacterized LOC111775208

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables vascular endothelial growth factor receptor 2 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of peptidyl-tyrosine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Rac protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of wound healing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell contact zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell adhesion molecule 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009153.3 Reference EquCab3.0 Primary Assembly

      Range
      14775193..14789910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023649814.1 → XP_023505582.1  cell adhesion molecule 4 isoform X1

      UniProtKB/TrEMBL
      A0A9L0TPV9, F7ATG1
      Related
      ENSECAP00000089180.1, ENSECAT00000110771.1
      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      smart00408
      Location:237 → 298
      IGc2; Immunoglobulin C-2 Type
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain

    2. XM_005596315.3 → XP_005596372.1  cell adhesion molecule 4 isoform X2

      UniProtKB/TrEMBL
      A0A9L0TK28, F7ATG1
      Related
      ENSECAP00000086691.1, ENSECAT00000116889.1
      Conserved Domains (4) summary
      smart00294
      Location:332 → 350
      4.1m; putative band 4.1 homologues' binding motif
      smart00408
      Location:225 → 286
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:219 → 296
      IG_like; Immunoglobulin like
      cl11960
      Location:128 → 208
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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