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    FNDC3B fibronectin type III domain containing 3B [ Equus caballus (horse) ]

    Gene ID: 100057824, updated on 8-Mar-2024

    Summary

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    Official Symbol
    FNDC3Bprovided by VGNC
    Official Full Name
    fibronectin type III domain containing 3Bprovided by VGNC
    Primary source
    VGNC:VGNC:18088
    See related
    Ensembl:ENSECAG00000019423
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (14568909..14901675)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 19 NC_009162.2 (12264302..12529136)

    Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111769017 Neighboring gene transmembrane protein 212 Neighboring gene uncharacterized LOC111769019 Neighboring gene uncharacterized LOC111769020 Neighboring gene growth hormone secretagogue receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibronectin type III domain-containing protein 3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009162.3 Reference EquCab3.0 Primary Assembly

      Range
      14568909..14901675
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023623306.1 → XP_023479074.1  fibronectin type III domain-containing protein 3B isoform X1

      UniProtKB/TrEMBL
      A0A3Q2HYE5
      Related
      ENSECAP00000026058.2, ENSECAT00000064078.2
      Conserved Domains (3) summary
      cd00063
      Location:572 → 666
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:886 → 947
      fn3; Fibronectin type III domain
      pfam15279
      Location:42 → 179
      SOBP; Sine oculis-binding protein

    2. XM_023623308.1 → XP_023479076.1  fibronectin type III domain-containing protein 3B isoform X2

      UniProtKB/TrEMBL
      A0A3Q2HYE5
      Conserved Domains (3) summary
      cd00063
      Location:543 → 637
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:857 → 918
      fn3; Fibronectin type III domain
      pfam15279
      Location:42 → 179
      SOBP; Sine oculis-binding protein

    3. XM_023623307.1 → XP_023479075.1  fibronectin type III domain-containing protein 3B isoform X1

      UniProtKB/TrEMBL
      A0A3Q2HYE5
      Conserved Domains (3) summary
      cd00063
      Location:572 → 666
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:886 → 947
      fn3; Fibronectin type III domain
      pfam15279
      Location:42 → 179
      SOBP; Sine oculis-binding protein

    4. XM_023623309.1 → XP_023479077.1  fibronectin type III domain-containing protein 3B isoform X3

      UniProtKB/TrEMBL
      A0A3Q2GUK5, F7E1R0
      Related
      ENSECAP00000024009.2, ENSECAT00000049333.2
      Conserved Domains (3) summary
      cd00063
      Location:536 → 630
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:850 → 911
      fn3; Fibronectin type III domain
      pfam15279
      Location:22 → 143
      SOBP; Sine oculis-binding protein
    Nucleotide Protein
    Heading Accession and Version

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