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    FOXP4 forkhead box P4 [ Equus caballus (horse) ]

    Gene ID: 100054333, updated on 8-Mar-2024

    Summary

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    Official Symbol
    FOXP4provided by VGNC
    Official Full Name
    forkhead box P4provided by VGNC
    Primary source
    VGNC:VGNC:18116
    See related
    Ensembl:ENSECAG00000000572
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 20 NC_009163.3 (41787004..41838423)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 20 NC_009163.2 (40903710..40937002)

    Chromosome 20 - NC_009163.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111769323 Neighboring gene uncharacterized LOC111769324 Neighboring gene uncharacterized LOC111769325 Neighboring gene MyoD family inhibitor Neighboring gene transcription factor EB

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein P4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009163.3 Reference EquCab3.0 Primary Assembly

      Range
      41787004..41838423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023624910.1 → XP_023480678.1  forkhead box protein P4 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2I4L4
      Related
      ENSECAP00000042891.1, ENSECAT00000029881.3
      Conserved Domains (2) summary
      smart00339
      Location:469 → 541
      FH; FORKHEAD
      pfam16159
      Location:305 → 372
      FOXP-CC; FOXP coiled-coil domain

    2. XM_023624909.1 → XP_023480677.1  forkhead box protein P4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2I4L4, F6TV57
      Related
      ENSECAP00000001102.3, ENSECAT00000001439.4
      Conserved Domains (2) summary
      smart00339
      Location:470 → 542
      FH; FORKHEAD
      pfam16159
      Location:306 → 373
      FOXP-CC; FOXP coiled-coil domain

    3. XM_001501047.6 → XP_001501097.4  forkhead box protein P4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2I4L4, F6TV57
      Conserved Domains (2) summary
      smart00339
      Location:470 → 542
      FH; FORKHEAD
      pfam16159
      Location:306 → 373
      FOXP-CC; FOXP coiled-coil domain

    4. XM_005603898.3 → XP_005603955.2  forkhead box protein P4 isoform X3

      UniProtKB/TrEMBL
      A0A3Q2I4L4
      Related
      ENSECAP00000039006.3, ENSECAT00000056905.3
      Conserved Domains (2) summary
      smart00339
      Location:458 → 530
      FH; FORKHEAD
      pfam16159
      Location:306 → 373
      FOXP-CC; FOXP coiled-coil domain

    5. XM_001501054.6 → XP_001501104.2  forkhead box protein P4 isoform X4

      UniProtKB/TrEMBL
      A0A3Q2I4L4
      Conserved Domains (2) summary
      smart00339
      Location:457 → 529
      FH; FORKHEAD
      pfam16159
      Location:305 → 372
      FOXP-CC; FOXP coiled-coil domain

    6. XM_023624911.1 → XP_023480679.1  forkhead box protein P4 isoform X5

      UniProtKB/TrEMBL
      A0A3Q2I4L4
      Conserved Domains (2) summary
      smart00339
      Location:361 → 433
      FH; FORKHEAD
      pfam16159
      Location:197 → 264
      FOXP-CC; FOXP coiled-coil domain
    Nucleotide Protein
    Heading Accession and Version

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