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    arpc3.S actin related protein 2/3 complex subunit 3 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100036831, updated on 11-Apr-2024

    Summary

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    Official Symbol
    arpc3.S
    Official Full Name
    actin related protein 2/3 complex subunit 3 S homeolog
    Primary source
    Xenbase:XB-GENE-17333483
    Locus tag
    XELAEV_18010654mg
    See related
    EnsemblRapid:ENSXLAG00005008463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    arpc3-a
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    Genomic context

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    See arpc3.S in Genome Data Viewer
    Location:
    chromosome: 1S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (150993073..151008212, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (135215957..135231212, complement)

    Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 S homeolog Neighboring gene anaphase promoting complex subunit 7 S homeolog Neighboring gene uncharacterized LOC108706441 Neighboring gene VPS29 retromer complex component S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Actin turnover-dependent fast dissociation of capping protein in the dendritic nucleation actin network: evidence of frequent filament severing. Miyoshi T, et al. J Cell Biol, 2006 Dec 18. PMID 17178911, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    actin-related protein 2/3 complex subunit 3-A
    Names
    Actin-related protein 2/3 complex subunit 3-A
    actin-related protein 2/3 complex subunit 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097119.1 → NP_001090588.1  actin-related protein 2/3 complex subunit 3-A

      See identical proteins and their annotated locations for NP_001090588.1

      Status: PROVISIONAL

      Source sequence(s)
      EF011866
      UniProtKB/Swiss-Prot
      A1DPK7
      UniProtKB/TrEMBL
      A0A974HFX8
      Related
      ENSXLAP00005024452.1, ENSXLAT00005025160.1
      Conserved Domains (1) summary
      pfam04062
      Location:1 → 173
      P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      150993073..151008212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018231941.2 → XP_018087430.1  actin-related protein 2/3 complex subunit 3-A isoform X1

      UniProtKB/TrEMBL
      A0A1L8HQQ6, A0A974DWS1
      Related
      ENSXLAP00005024457.1, ENSXLAT00005025165.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1DPK7.1 GenPept UniProtKB/Swiss-Prot:A1DPK7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases