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    LOC100034005 60S ribosomal protein L17 [ Equus caballus (horse) ]

    Gene ID: 100034005, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC100034005
    Gene description
    60S ribosomal protein L17
    See related
    Ensembl:ENSECAG00000011547
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    RPL17
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (71511121..71515088, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 8 NC_009151.2 (68065987..68069934, complement)

    Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene dymeclin Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene chromosome 8 C18orf32 homolog Neighboring gene lipase G, endothelial type Neighboring gene acetyl-CoA acyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L17
    Names
    ribosomal protein L17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009151.3 Reference EquCab3.0 Primary Assembly

      Range
      71511121..71515088 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003365546.4 → XP_003365594.1  60S ribosomal protein L17

      See identical proteins and their annotated locations for XP_003365594.1

      UniProtKB/TrEMBL
      F7BAL2
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional

    2. XM_014727742.2 → XP_014583228.1  60S ribosomal protein L17

      UniProtKB/TrEMBL
      F7BAL2
      Related
      ENSECAP00000009463.2, ENSECAT00000012031.3
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional
    Nucleotide Protein
    Heading Accession and Version

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