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    TMOD3 tropomodulin 3 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100026323, updated on 3-Apr-2024

    Summary

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    Gene symbol
    TMOD3
    Gene description
    tropomodulin 3
    See related
    Ensembl:ENSMODG00000040618
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (187455555..187540877)
    103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (182700711..182782006)

    Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103095845 Neighboring gene LysM domain containing 2 Neighboring gene tropomodulin 2 Neighboring gene LEO1 homolog, Paf1/RNA polymerase II complex component Neighboring gene mitogen-activated protein kinase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tropomyosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in myofibril assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pointed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in myofibril IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in striated muscle thin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomodulin-3
    Names
    tropomodulin 3 (ubiquitous)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077227.1 Reference mMonDom1.pri

      Range
      187455555..187540877
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007479960.2 → XP_007480022.1  tropomodulin-3 isoform X2

      See identical proteins and their annotated locations for XP_007480022.1

      UniProtKB/TrEMBL
      A0A5F8GZ24, A0A5F8HFQ7
      Conserved Domains (2) summary
      cd00116
      Location:220 → 292
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam03250
      Location:5 → 146
      Tropomodulin; Tropomodulin

    2. XM_056810202.1 → XP_056666180.1  tropomodulin-3 isoform X3

      UniProtKB/TrEMBL
      F6RHX8

    3. XM_056810200.1 → XP_056666178.1  tropomodulin-3 isoform X1

    4. XM_056810201.1 → XP_056666179.1  tropomodulin-3 isoform X2

      UniProtKB/TrEMBL
      A0A5F8HFQ7

    5. XM_001370107.4 → XP_001370144.1  tropomodulin-3 isoform X2

      See identical proteins and their annotated locations for XP_001370144.1

      UniProtKB/TrEMBL
      A0A5F8GZ24, A0A5F8HFQ7
      Related
      ENSMODP00000058664.1
      Conserved Domains (2) summary
      cd00116
      Location:220 → 292
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam03250
      Location:5 → 146
      Tropomodulin; Tropomodulin
    Nucleotide Protein
    Heading Accession and Version

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