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    CAPN10 calpain 10 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100022544, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CAPN10
    Gene description
    calpain 10
    See related
    Ensembl:ENSMODG00000002704
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (530221592..530237399)
    103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (537442652..537459310, complement)

    Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 D3-like Neighboring gene cytochrome P450 2J2-like Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene eukaryotic translation initiation factor 4E family member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calpain-10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077228.1 Reference mMonDom1.pri

      Range
      530221592..530237399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007486086.3 → XP_007486148.2  calpain-10 isoform X1

    2. XM_007486085.3 → XP_007486147.2  calpain-10 isoform X1

    3. XM_007486087.3 → XP_007486149.2  calpain-10 isoform X2

    4. XM_007486088.3 → XP_007486150.2  calpain-10 isoform X2

    5. XM_007486091.3 → XP_007486153.2  calpain-10 isoform X3

    RNA

    1. XR_008916886.1 RNA Sequence

    2. XR_001627404.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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