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LOC4344262 pentatricopeptide repeat-containing protein At3g18020 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4344262, updated on 21-Dec-2023

Summary

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Gene symbol
LOC4344262
Gene description
pentatricopeptide repeat-containing protein At3g18020
Locus tag
OSNPB_070674300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0037D09.4; P0618H09.2
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Genomic context

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Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (28503014..28505700, complement)

Chromosome 7 - NC_029262.1Genomic Context describing neighboring genes Neighboring gene UDP-glucuronic acid decarboxylase 2 Neighboring gene 60S ribosomal protein L22-2 Neighboring gene phylloplanin Neighboring gene phylloplanin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029262.1 Chromosome 7 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pentatricopeptide repeat-containing protein At3g18020
Names
Os07g0674300
pentatricopeptide (PPR) repeat-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029262.1 Reference IRGSP-1.0 Primary Assembly

    Range
    28503014..28505700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015792277.2 → XP_015647763.1  pentatricopeptide repeat-containing protein At3g18020

    UniProtKB/TrEMBL
    A2YPV3, A3BNC5, Q6YSW9
    Conserved Domains (2) summary
    PLN03218
    Location:243 → 628
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:384 → 412
    PPR; PPR repeat [structural motif]
Nucleotide Protein
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