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LOC4330096 ferredoxin-thioredoxin reductase, variable chain [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330096, updated on 21-Dec-2023

Summary

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Gene symbol
LOC4330096
Gene description
ferredoxin-thioredoxin reductase, variable chain
Locus tag
OSNPB_020638300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0010C01.4
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Genomic context

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See LOC4330096 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (25589926..25590834, complement)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene uncharacterized protein At1g65710 Neighboring gene vacuolar-sorting protein BRO1 Neighboring gene ethylene-responsive transcription factor ERF054

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in photosynthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ferredoxin-thioredoxin reductase, variable chain
Names
OSJNBa0014E22.28
Os02g0638300
putative ferredoxin-thioredoxin reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    25589926..25590834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767986.2 → XP_015623472.1  ferredoxin-thioredoxin reductase, variable chain

    UniProtKB/TrEMBL
    A2X7M2, A3A9E7, Q0DZ91, Q6H5V4
    Conserved Domains (1) summary
    pfam02941
    Location:70 → 143
    FeThRed_A; Ferredoxin thioredoxin reductase variable alpha chain
Nucleotide Protein
Heading Accession and Version

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