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ZIP9 ZIP metal ion transporter family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829439, updated on 15-Oct-2023

Summary

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Gene symbol
ZIP9
Gene description
ZIP metal ion transporter family
Primary source
Araport:AT4G33020
Locus tag
AT4G33020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATZIP9; F4I10.1
Summary
member of Fe(II) transporter isolog family
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Genomic context

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See ZIP9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (15932420..15934762, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene calcineurin B-like protein 10 Neighboring gene glycine decarboxylase P-protein 1 Neighboring gene sulfoquinovosyldiacylglycerol 1 Neighboring gene Thioredoxin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of putative target genes of bZIP19, a transcription factor essential for Arabidopsis adaptation to Zn deficiency in roots. Inaba S, et al. Plant J, 2015 Oct. PMID 26306426
  2. Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors. Weber M, et al. Plant J, 2004 Jan. PMID 14690510
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metal ion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to zinc ion IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in zinc ion transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ZIP metal ion transporter family
NP_195028.1
  • ZIP9; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, cation transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 3 (TAIR:AT1G60960.1); Has 1755 Blast hits to 1721 proteins in 263 species: Archae - 0; Bacteria - 88; Metazoa - 470; Fungi - 500; Plants - 517; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15932420..15934762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342195.1 → NP_001329099.1  ZIP metal ion transporter family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UWY3, A0A1P8B6P2, A0A384L3U2
    Conserved Domains (1) summary
    cl00437
    Location:26 → 391
    Zip; ZIP Zinc transporter

  2. NM_119456.2 → NP_195028.1  ZIP metal ion transporter family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195028.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82643
    Conserved Domains (1) summary
    cl00437
    Location:2 → 344
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O82643.1

Gene LinkOut

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