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AT3G14280 LL-diaminopimelate aminotransferase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820648, updated on 15-Feb-2024

Summary

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Gene symbol
AT3G14280
Gene description
LL-diaminopimelate aminotransferase
Primary source
Araport:AT3G14280
Locus tag
AT3G14280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (4761432..4762457, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene LURP-one-like protein (DUF567) Neighboring gene phosphatidylinositol-4-phosphate 5-kinase family protein Neighboring gene ncRNA Neighboring gene 20S proteasome alpha subunit E2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_112286.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LL-diaminopimelate aminotransferase
NP_188045.1
  • unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4761432..4762457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112286.5 → NP_188045.1  LL-diaminopimelate aminotransferase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_188045.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VA72, A0A384KCN9, Q9LUL9
Nucleotide Protein
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