1: CDC27 cell division cycle 27 homolog (S. cerevisiae) [ Homo sapiens ]

GeneID: 996 updated 21-Nov-2009

[Top][Help]Summary

Official Symbol
CDC27provided by HGNC
Official Full Name
cell division cycle 27 homolog (S. cerevisiae)provided by HGNC
Primary Source
HGNC:1728
See related
Ensembl:ENSG00000004897; HPRD:00304; MIM:116946
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
APC3; HNUC; CDC27Hs; D0S1430E; D17S978E; CDC27
Summary
The protein encoded by this gene shares strong similarity with Saccharomyces cerevisiae protein Cdc27, and the gene product of Schizosaccharomyces pombe nuc 2. This protein is a component of anaphase-promoting complex (APC), which is composed of eight protein subunits and highly conserved in eucaryotic cells. APC catalyzes the formation of cyclin B-ubiquitin conjugate that is responsible for the ubiquitin-mediated proteolysis of B-type cyclins. This protein and 3 other members of the APC complex contain the TPR (tetratricopeptide repeat), a protein domain important for protein-protein interaction. This protein was shown to interact with mitotic checkpoint proteins including Mad2, p55CDC and BUBR1, and thus may be involved in controlling the timing of mitosis. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq]

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 17; Location: 17q12-q23.2See CDC27 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. The interaction is direct and is mediated by the tandem BRCA1 C-terminal domains of MDC1 and the C terminus of the Cdc27 (APC3) subunit of the anaphase-promoting complex/cyclosome.
PubMed 2. the spindle checkpoint may regulate CDC27/APC activity at mitosis
PubMed 3. HOXC10 co-immunoprecipitates the APC subunit CDC27, and its in vitro degradation is reduced in APC-depleted extracts or by competition with the APC substrate cyclin A.

[Top][Help]Interactions

Description ..........
  Product Interactant Other Gene Complex Source Pubs          
 
  NP_001247.2   NP_057321.2   ANAPC5      HPRD    PubMed
 
  NP_001247.2   NP_001202.3   BUB1B      HPRD    PubMed
 
  NP_001247.2   NP_003894.2   CDC16      HPRD    PubMed
 
  NP_001247.2   NP_001246.1   CDC20      HPRD    PubMed
 
  NP_001247.2   NP_057347.2   FZR1      HPRD    PubMed
Cdh1 interacts with Cdc27.
  NP_001247.2   NP_057347.2   FZR1      BIND    PubMed
 
  NP_001247.2   NP_059105.2   HOXC10      HPRD    PubMed
 
  NP_001247.2   NP_002349.1   MAD2L1      HPRD    PubMed
Pin1 interacts with Cdc27.
  NP_001247.2   NP_006212.1   PIN1      BIND    PubMed
 
  NP_001247.2   Pin1   PIN1      HPRD    PubMed
 
  NP_001247.2   NP_006238.1   PPP5C      HPRD    PubMed
 
  NP_001247.2   NP_005405.1   SKIL      HPRD    PubMed
 
  NP_001247.2   NP_005892.1   SMAD2      HPRD    PubMed
 
  NP_001247.2   NP_005893.1   SMAD3      HPRD    PubMed
Affinity Capture-Western; Co-purification
  BioGRID:107431   BioGRID:122229   ANAPC1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:115665   ANAPC10      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:119591   ANAPC11      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:118982   ANAPC4      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:119537   ANAPC5      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:119538   ANAPC7      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:115585   APC2      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:107166   BUB1B      BioGRID    PubMed
Affinity Capture-Western; Two-hybrid
  BioGRID:107431   BioGRID:114400   CDC16      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107431   BioGRID:107427   CDC20      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:114242   CDC23      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:128878   CDC26      BioGRID    PubMed
Affinity Capture-Western; Reconstituted Complex
  BioGRID:107431   BioGRID:107434   CDH1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:107460   CDKN1A      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:119489   FZR1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:110260   MAD2L1      BioGRID    PubMed
Affinity Capture-Western; Far Western
  BioGRID:107431   BioGRID:111317   PIN1      BioGRID    PubMed
Reconstituted Complex
  BioGRID:107431   BioGRID:111528   PPP5C      BioGRID    PubMed
Two-hybrid
  BioGRID:107431   BioGRID:202349   Ppp5c      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:110262   SMAD2      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:110263   SMAD3      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:131991   SPATC1      BioGRID    PubMed
Affinity Capture-Western
  BioGRID:107431   BioGRID:113123   TTK      BioGRID    PubMed

[Top][Help]General gene information

Markers

STS-S78234(e-PCR)
Links: UniSTS:58144
WI-13636(e-PCR)
Links: UniSTS:17981
L18241(e-PCR)
Links: UniSTS:34120
A007J33(e-PCR)
Links: UniSTS:56193
RH65445(e-PCR)
Links: UniSTS:25989
RH102849(e-PCR)
Links: UniSTS:97183
CDC27_1878(e-PCR)
Links: UniSTS:280488
AI452358(e-PCR)
Links: UniSTS:160173
D14S145(e-PCR)
Links: UniSTS:148416
RH46196(e-PCR)
Links: UniSTS:14547
STS-H82965(e-PCR)
Links: UniSTS:6869
T03706(e-PCR)
Links: UniSTS:20949

Homology

Homologs of the CDC27 gene The CDC27 gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.pombe, S.cerevisiae, K.lactis, E.gossypii, M.grisea, N.crassa, A.thaliana, and rice.


Map Viewer (Mouse, Rat)

Pathways

KEGG pathway: Cell cycle
04110
KEGG pathway: Progesterone-mediated oocyte maturation
04914
KEGG pathway: Ubiquitin mediated proteolysis
04120
Reactome Event:Cell Cycle Checkpoints
REACT_1538
Reactome Event:Cell Cycle, Mitotic
REACT_152

[Top][Help]General protein information

Preferred Names
cell division cycle protein 27
Names
cell division cycle protein 27
nuc2 homolog
anaphase-promoting complex, protein 3

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_001114091.1NP_001107563.1  cell division cycle protein 27 isoform 1

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AC002558,BC011656,BP234964,S78234
    Consensus CDS
    CCDS45720.1
    UniProtKB/Swiss-Prot
    P30260
    Conserved Domains (1) summary
    cd00189
    Location:574673
    Blast Score: 236
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...
  2. NM_001256.3NP_001247.3  cell division cycle protein 27 isoform 2

    Description
    Transcript Variant: This variant (2) has an alternate splice site, as compared to variant 1. The resulting isoform 2 lacks an internal segment and has the same N- and C-termini, as compared to isoform 1.
    Source sequence(s)
    AC002558,BP234964,S78234
    Consensus CDS
    CCDS11509.1
    UniProtKB/Swiss-Prot
    P30260
    Conserved Domains (1) summary
    cd00189
    Location:568667
    Blast Score: 236
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi...

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000017.10

    Range
    45195309..45266664, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_010783.15 

    Range
    10469461..10540816, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000060.1

    Range
    41645339..41716723, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_926883.1 

    Range
    418498..489882, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000149.1

    Range
    40572495..40644749, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838448.1 

    Range
    440475..512729, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AC002558.2  (9602..78640)   None
  genomic   AY518321.1   AAR89911.1
  genomic   CH471231.2   EAW57686.1
       EAW57687.1
       EAW57688.1
       EAW57689.1
  mRNA   AK296881.1   BAG59442.1
  mRNA   AK299342.1   BAG61343.1
  mRNA   AU135593.1   None
  mRNA   BC011656.2   AAH11656.1
  mRNA   BI548077.1   None
  mRNA   BP234964.1   None
  mRNA   CR610883.1   None
  mRNA   CR613932.1   None
  mRNA   DQ786193.1   None
  mRNA   S78234.1   AAB34378.1
  mRNA   U00001.1   AAA60471.1
  other-genetic   DQ892780.2   ABM83706.1
  other-genetic   DQ896027.2   ABM87026.1
Protein Accession   Links
P30260.2   GenPept   UniProtKB/Swiss-Prot:P30260

[Top][Help]Additional Links